cyjShiny: A cytoscape.js R Shiny Widget for network visualization and analysis.

Authors

Augustin Luna
Omar Shah
Chris Sander
Paul Shannon, Institute for Systems Biology, Seattle, Washington, United States of America.

Document Type

Article

Publication Date

1-1-2023

Publication Title

PLoS One

Keywords

washington; isb

Abstract

cyjShiny is an open-source R package that allows users to embed network visualization into Shiny apps and R Markdown documents. cyjShiny (https://github.com/cytoscape/cyjShiny) builds on the cytoscape.js Javascript graph library. Additionally, the package provides helper functions to convert common R data representations (e.g., data.frame) into forms compatible with cytoscape.js.

Department

Institute for Systems Biology

Recommended Citation

Luna, Augustin; Shah, Omar; Sander, Chris; and Shannon, Paul, "cyjShiny: A cytoscape.js R Shiny Widget for network visualization and analysis." (2023). Articles, Abstracts, and Reports. 7836.
https://digitalcommons.providence.org/publications/7836